山东大学学报(理学版) ›› 2015, Vol. 50 ›› Issue (01): 42-49.doi: 10.6040/j.issn.1671-9352.0.2014.286
刘元超1,2, 赵晶3, 初红军1,2,4, 董潭成4, 韩丽丽1,2, 陶永善2, 葛炎2
LIU Yuan-chao1,2, ZHAO Jing3, CHU Hong-jun1,2,4, DONG Tan-cheng4, HAN Li-li1,2, TAO Yong-shan2, GE Yan2
摘要: 采用PCR和测序技术,分析了30只蒙古国西北部狼线粒体DNA(mtDNA)D-loop区519 bp核酸序列,基于 mtDNA D-loop区序列对蒙古国狼和NCBI公布的其它狼种群进行系统树构建。结果显示:蒙古国狼存在7种单倍型,检测到29处变异位点,占所分析位点总数的4.9%,各单倍型间的遗传距离为0.006~0.024平均遗传距离是0.004±0.001。单倍型多样性为0.952±0.096,核苷酸多性为0.011 60±0.006 46。聚类分析表明,蒙古国狼分布在2个支系中,与中国新疆、内蒙古种群亲缘关系较近,与中国青海、西藏、喜马拉雅山脉种群的亲缘关系较远。蒙古国西北部狼种群具有比较丰富的遗传多样性,在进化的历史过程中受到其他狼种群的影响较大。中国青海、西藏、喜马拉雅山附近的狼种群应同属于一个群体,该研究为蒙古国乃其与我国毗邻区域狼的遗传多样性保护提供了理论依据。
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[1] HARRINGTON F H, PAQUET P C. Wolves of the world, perspectives of behavior, ecology and conservation[M]. New Jersey: Noyes Pub, Park Ridge, 1982:474-545. [2] MECH L D. The wolf: ecological and behavior of an endangered species[M]. Natural New York: History Press, 1970:384. [3] MECH L D. Mammalian species: Canis lupus[J]. The American society of mammalogists, 1974, 37(1):1-6. [4] MECH L D. Wolves: Behavior, Ecology, and Conservation[M]. Chicago: University of Chicago Press, 2007: 428. [5] BULLERWELL C E, GRAY M W. Evolution of the mitochondrial genome: protist connections to animals, fungi and plants[J]. Current Opini on in Microbiology, 2004, 7(5):528-534. [6] 李明, 饶刚, 魏辅文,等.小熊猫种群遗传结构和地理分化[J]. 动物学报, 2002, 48(4):480-486. LI Ming, RAO Gang, WEI Fuwen, et al. The little panda population genetic structureand differentiation of Geography[J]. Acta Zoologica Sinica, 2002, 48(4):480-486. [7] BOWLING A T, DEL VALLE A, BOWLING M. A pedigree-based study of mitochondrialD-loop DNA sequence variation among Arabian horses[J]. Animal Genetics, 2000, 31(1):1-7. [8] 王秀辉,高中信,于学伟,等. 狼亚种分化的RAPD分子证据[J]. 东北林业大学学报, 2000, 28(5):110-113. WANG Xiuhui, GAO Zhongxin, YU Xuewei, et al. Molecular evidence of RAPD in wolf subspecies differentiation[J]. Journal of Northeast Forestry University, 2000, 28(5):110-113. [9] 罗理杨, 金煜, 杨公社. 中国狼的种内系统发育关系与亚种分化[J]. 东北林业大学学报, 2003,31(5):81-83. LUO Liyang, JIN Yu, YANG Gongshe. The Phylogenetic relationship and subspecies differentiation of chinese wolf[J]. Journal of Northeast Forestry University, 2003, 31(5):81-83. [10] RAMESH K Aggarwal, RAMADEVI J, LAIJI Singh. Ancient origin and evolution of the Indian wolf: evidence from mitochondrial DNA typing of wolves from Trans-Himalayan region and Pennisular India[J]. Genome Biology, 2003, 4:6-12. [11] DINESH K Sharma, JESUS E Maldonado, YADENDRADEV V Jhala, et al. Ancient wolf lineages in India[J]. Biology letter, 2004, 271(3):1-4. [12] SOROKIN P A, SOLDATOVA N V, LUKAREVSKIY V S, et al. Genetic diversity and relations of the goitered gazelle (Gazella subgutturosa) groups from Uzbekistan, Turkmenistan and Azerbaijan: analysis of the D-loop of mitochondrial DNA[J]. Biology bulletin, 2011, 38(6):585-590. [13] THOMPSON J D, GIBSON T J, PLEWNIAK F, et al. The Clustalx windows Interface: flexible strategies for multiple sequence alignment aided by quality analysis tools[J]. Nucleic Acids Res, 1997, 25(24):4876-4882. [14] TAMURA K, PETERSON D, PETERSON N, et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods[J]. Molecular Biology and Evolution, 2011, 28(10):2731-2739. [15] 常洪. 动物遗传资源学[M]. 北京:科学出版社, 2009:1-208. [16] BANDELT H J, FORSTER P, ARNE Rohl. Median-joining networks for inferring intraspecific phylogenies[J]. Molecular Biology and Evolution, 1999, 16(1):37-48. [17] 孟超, 张洪海, 陈玉才. 中国狼(Canis lupus chanco)线粒体全基因组序列分析[J].中国生物化学与分子生物学报, 2008,24(12):1170-1176. MENG Chao, ZHANG Honghai, CHEN Yucai. Sequencing and analysis of mitochondrial genome of chinese grey wolf(Canis lupus chanco)[J]. Chinese Journal of Biochemistry and Molecular Biology, 2008, 24(12):1170-1176. [18] YANG Juan. The polymorphism of mitochondrial DNA and heredi ty breeding of lives tock[J]. Sichuan Animal & Veterinary Sciences, 2001, 28(1):32-33. [19] GABRIEL M N, CALLOWAY C D, REYNOLDS R L, et al. Populati on variation of human mitochondrial DNA hypervariable regions and in 105 Croatian individuals demonst rated by immobilized sequence specific oligonucleotide probenalysis[J]. Croatian Medical Journal, 2001, 42(3):328- 335. [20] 亐开兴,连林生,聂龙,等.云南保山猪线粒体DNA D-loop区序列初步分析[J].遗传,2003,25(5):526-528. YU Kaixing, LIAN Linsheng, NIE Long, et al. Primary analysis of mitochondrial DNA D-loop region sequence in Bao shan pig[J]. Hereditas, 2003, 25(5):526- 528. [21] NEI M, TAJIMA F. DNA polymorphism detectable by restriction endonucleases[J]. Genetics, 198l, 97(1):145-163. [22] 窦海龙.中国部分地区狼遗传多样性及系统发育分析[D].曲阜:曲阜师范大学生命科学学院,2013. [23] GOMER?IC' Tomislav, SINDI?IC' Magda, GALOV Ana, et al. High genetic variability of the greywolf (Canis lupus L.) population from croatia as revealed by mitochondrial DNA control region sequences[J]. Zoological Studies, 2010, 49(6):816-823. [24] VILA C, AMORIM J R, LEOANRD J A, et al. Mitochondrial DNA phylogeography and population history of the grey wolf Canis lupus[J]. Molecular Ecologyy, 1999, 8(12):2089-2103. [25] PILOT M, JEDRZEJEWSKI W, BRANICKI W, et al. Ecological factors infuence population genetic structure of European grey wolves[J]. Molecular Ecologyy, 2006, 15(14):4533-4553. [26] 肖明松, 崔峰, 康健, 等. 淮河野生鲇鱼线粒体Cytb基因的序列变异与遗传结构分析[J].动物学杂志, 2013, 48(1):75-86. XIAO Mingsong, CUI Feng, KANG Jian, et al. Genetic structure and variation of wild chinese catfish from Huaihe river based on cytochrome b gene sequences[J]. Chinese Journal of Zoology, 2013, 48(1):75-86. [27] RODETIC M P, EDWARD C H. Molecular Evolution[M]. Wasington: BlackWell Science Ltd, 1998: 1-346. |
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